Adalaide Byrd, the Nevada based judge, scored the fight inexplicably 118-110 in favour of Alvarez.
Dave Moretti had it 115-113 in favour of WBA, IBF and WBC middleweight champion Golovkin while Don Trella had it 114-114 which made it a split draw.
But Nevada State Athletic Commission executive director Bob Bennett will not punish the female judge for her scoring.
Bennett will review the bout with Byrd but has full confidence in her going forward.
He said: “Of course there’s a plan. I’ll go over the fight with her.
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“She has to articulate why she scored each round as she did. She was off her mark.
“We’ll go over the fight and by and large we train very hard here to prepare for the fight. Unfortunately, she has had a bad night.
“Adalaide, in my estimation, is an outstanding judge.
“She’s done over 115 title fights and/or elimination bouts.
“She does a great deal of our training. Takes a lot of our judges under her wing. I think being a judge is a very challenging position.
“Unfortunately, Adalaide was a little wide. I’m not making any excuses. I think she’s an outstanding judge, and in any business, sometimes you have a bad day.
“She saw the fight differently. It happens.”